MRIQC: individual T1w report

Summary

  • BIDS filename: sub-6005_ses-1_T1w.
  • Date and time: 2022-12-12, 04:15.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6930045301914182
cnr1.9089320545889252
efc0.5863265257928694
fber899.3514682249818
fwhmavg4.432166666666667
fwhmx4.29863
fwhmy4.97978
fwhmz4.01809
icvscsf0.21795463308480797
icvsgm0.4098766375305009
icvswm0.3721687293846911
inumed1.8073269128799438
inurange0.7961468815803527
qi10.0
qi20.0030624188638631576
rpvecsf24.740955162491684
rpvegm13.356372088980557
rpvewm17.27200096530192
sizex176
sizey256
sizez256
snrcsf3.347378651909013
snrgm9.594258677025286
snrtotal10.877440207509295
snrwm19.690683293593583
snrdcsf24.073773399283986
snrdgm54.595500202429065
snrdtotal48.671914354254774
snrdwm67.34646946105129
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk5.10178059261772
summarybgmad9.727850088636668
summarybgmean19.876493073028712
summarybgmedian17.531887590885162
summarybgn2465883.0
summarybgp056.561335176229477
summarybgp9540.10288059711456
summarybgstdv10.913615683652335
summarycsfk5.343947826761475
summarycsfmad91.98655043814833
summarycsfmean380.01327584798366
summarycsfmedian357.4615404009819
summarycsfn38896.0
summarycsfp05245.4333036020398
summarycsfp95588.8404640555382
summarycsfstdv106.7871258226923
summarygmk-0.1484282074569152
summarygmmad85.52725797929358
summarygmmean813.6708114188905
summarygmmedian810.6660836935043
summarygmn20381.0
summarygmp05681.3290446996689
summarygmp95960.6844511628151
summarygmstdv84.49284337111406
summarywmk0.7608079299499608
summarywmmad45.68198401623779
summarywmmean1003.0048244706521
summarywmmedian999.9999715387821
summarywmn220289.0
summarywmp05924.1509369015694
summarywmp951092.2260987758636
summarywmstdv50.78532252438241
tpmoverlapcsf0.1629372537136078
tpmoverlapgm0.4423444867134094
tpmoverlapwm0.5024999976158142
wm2max0.538650757747116
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime12:59:14.675000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[0.012765, 0.992393, 0.122446, 0.0455195, 0.121752, -0.991516]
ImageOrientationTextSag>Tra(-2.5)>Cor(1.0)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0315432
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber21
ShimSetting[2653, 5451, -7476, 74, -129, -895, 184, -242]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp252.792
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum132aca8e9325baa5114207a61fb7ea46
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.